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structure nameX-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN ALPHA THROMBIN AND A DUPLEX/QUADRUPLEX 31-MER DNA APTAMER
(THROMBIN HEAVY CHAIN)
referenceRusso Krauss et al. 'Nucleic 44 983 2016
sourceHOMO SAPIENS
experimentX-ray (resolution=2.98, R-factor=0.169)
structural superfamilyTrypsin-like serine proteases;
sequence familyTrypsin;
multimeric complexes1hap_HL 1hut_HL 4dih_HL 4dii_HL 4lz4_CD 6evv_HL 6gn7_HL 7zkl_HL
reference complex6z8v_H
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIHRYRNII

Estimated binding specificities ?

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# IC=9.518 IC/col=0.732 n_of_columns=13 specificity:   
A |   0   0   0   0  24  24  24  24  24  14   0   0   0
C |   0   0   0   0  24  24  24  24  24  14   0   0   0
G |  96   0   0  96  24  24  24  24  24  52   0   0  96
T |   0  96  96   0  24  24  24  24  24  16  96  96   0
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updated Mon Dec 18 12:22:12 2023