4uuv_GJ : 3D-footprint complex

structure name	STRUCTURE OF THE DNA BINDING ETS DOMAIN OF HUMAN ETV4 IN COMPLEX WITH DNA
reference	Arrowsmith et al. J.Biol.Chem. 290 13692 2015
source	HOMO SAPIENS
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4uno_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4uuv_G interface=54,55,58,59,61,62, alqlwqflvallddptnahfiawtgrgmefkliepeevarlwgiqknrpamnyDKlsRSlRYyyekgimqkvageryvykfvcepdalfsmafpd > 4uuv_J interface=53,54,57,58,60,61, lqlwqflvallddptnahfiawtgrgmefkliepeevarlwgiqknrpamnyDKlsRSlRYyyekgimqkvageryvykfvcepdalfsmafpd
interface signature	DKRSRY/DKRSRY

Estimated binding specificities ?

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# IC=13.764 IC/col=0.810 n_of_columns=17

specificity:

A |   6   6  24   5   0   0   1  24   0  96  24   0   0   0  75  24  65
C |   0  75  24   5  96  96   5  24   0   0  24  96   0   0  10  24   5
G |   0   5  24   5   0   0  85  24   0   0  24   0  96  96   5  24  16
T |  90  10  24  81   0   0   5  24  96   0  24   0   0   0   6  24  10

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updated Fri Dec 15 20:46:04 2023