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3D-footprint cannot reliably estimate the specificity of proteins that bind to single-stranded DNA molecules, as these often accumulate many base contacts which distort the calculations.


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updated Mon Dec 18 11:24:41 2023
structure nameCRYSTAL STRUCTURE OF PC4 W89Y MUTANT COMPLEX WITH DNA
(ACTIVATED RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR P15)
referenceZhao et al. Sci.Rep. 5 8789 2015
sourceHOMO SAPIENS
experimentX-ray (resolution=1.97, R-factor=0.188)
structural superfamilyssDNA-binding transcriptional regulator domain;
sequence familyTranscriptional Coactivator p15 PC4;
multimeric complexes2c62_AB 4usg_AB
reference complex2c62_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence