interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF R.NGOAVII RESTRICTION ENDONUCLEASE B3 DOMAIN WITH COGNATE DNA
(Restriction endonuclease R.NgoVII)
referenceTamulaitiene et al. 'Nucleic 42 14022 2014
sourceNeisseria gonorrhoeae
experimentX-ray (resolution=2.70, R-factor=0.222)
redundant complexes4rd5
reference complex4rd5_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSRREEISDYKNRL

Estimated binding specificities ?

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# IC=6.438 IC/col=0.920 n_of_columns=7 specificity:   
A |  12   1   1   0   0   2  20
C |  12   1  94  95   1  91  39
G |  12  93   1   1  95   2  20
T |  60   1   0   0   0   1  17
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updated Mon Dec 18 11:16:13 2023