interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF R.NGOAVII RESTRICTION ENDONUCLEASE B3 DOMAIN WITH COGNATE DNA
(Restriction endonuclease R.NgoVII)
referenceTamulaitiene et al. 'Nucleic 42 14022 2014
sourceNeisseria gonorrhoeae
experimentX-ray (resolution=2.70, R-factor=0.217)
redundant complexes4rdm_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSRREEISDYKNRL

Estimated binding specificities ?

readout + contactlogo
# IC=6.467 IC/col=0.924 n_of_columns=7 specificity:   
A |   4   0   0   0   0  60  39
C |   2  95   0   0  93  12  24
G |  88   0  96  95   1  12  22
T |   2   1   0   1   2  12  11
scan!

home
updated Tue Dec 19 09:26:08 2023