interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF ALKB PROTEIN WITH COFACTORS BOUND TO DSDNA CONTAINING M6A
(Alpha-ketoglutarate-dependent dioxygenase AlkB)
referenceZhu et al. Angew.Chem.Int.Ed.Engl. 53 3659 2014
sourceEscherichia coli
experimentX-ray (resolution=1.58, R-factor=0.179)
structural superfamilyClavaminate synthase-like;
sequence family2OGFeII oxygenase superfamily;
reference complex4nih_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureCKR

Estimated binding specificities ?

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# IC=3.101 IC/col=0.775 n_of_columns=4 specificity:   
A |   0   0  13  54
C |   0   0  13  13
G |  96  96  16  16
T |   0   0  54  13
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updated Mon Dec 18 11:00:46 2023