interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF THE GLOBAL TRANSCRIPTION REGULATOR FAPR FROM STAPHYLOCOCCUS AUREUS IN COMPLEX WITH DNA OPERATOR
(TRANSCRIPTION FACTOR FAPR)
referenceBuschiazzo et al. 'Plos 9 3108 2013
sourceSTAPHYLOCOCCUS AUREUS
experimentX-ray (resolution=3.15, R-factor=0.187)
structural superfamilyThioesterase/thiol ester dehydrase-isomerase;"Winged helix" DNA-binding domain;
multimeric complexes4a12_ABCD
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSQTRLR

Estimated binding specificities ?

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# IC=4.960 IC/col=0.620 n_of_columns=8 specificity:   
A |   9  96   9  24  73  24   7   0
C |   7   0   7  24   7  24  75   0
G |   7   0  73  24   7  24   7   0
T |  73   0   7  24   9  24   7  96
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updated Tue Dec 19 08:34:56 2023