interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF VIRB CORE DOMAIN COMPLEXED WITH THE CIS-ACTING SITE UPSTREAM ICSP PROMOTER
(Virulence regulon transcriptional activator VirB)
referenceWaltersperger et al. 'Nucleic 41 10529 2013
sourceShigella flexneri 2a
experimentX-ray (resolution=2.77, R-factor=0.243)
structural superfamilyKorB DNA-binding domain-like;
reference complex3vwb_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRATR

Estimated binding specificities ?

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# IC=1.072 IC/col=0.179 n_of_columns=6 specificity:   
A |  54  21  22  19   9  60
C |  14  21  22  20  69  12
G |  14  21  25  19   9  12
T |  14  33  27  38   9  12
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updated Mon Dec 18 09:27:48 2023