interface graph thumbnail
legend  pdf

structure nameMUTM INTERROGATION COMPLEX 6
(DNA GLYCOSYLASE)
referenceVerdine et al. Proc.Natl.Acad.Sci.USA 109 1086 2012
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=1.65, R-factor=0.189)
structural superfamilyN-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain;Glucocorticoid receptor-like DNA-binding domain;
sequence familyFormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2; Zinc finger found in FPG and IleRS;
reference complex3u6p_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRFR

Estimated binding specificities ?

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# IC=4.647 IC/col=0.929 n_of_columns=5 specificity:   
A |  45   0   0  96   8
C |  16  96  96   0   8
G |  16   0   0   0  72
T |  19   0   0   0   8
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updated Mon Dec 18 09:08:00 2023