interface graph thumbnail
legend  pdf

structure nameMUTM SLANTED COMPLEX 1
(Formamidopyrimidine-DNA glycosylase)
referenceVerdine et al. Proc.Natl.Acad.Sci.USA 109 1086 2012
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=1.95, R-factor=0.196)
structural superfamilyN-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain;Glucocorticoid receptor-like DNA-binding domain;
sequence familyFormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2; Zinc finger found in FPG and IleRS;
reference complex3u6p_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRMRFRR

Estimated binding specificities ?

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# IC=4.101 IC/col=0.820 n_of_columns=5 specificity:   
A |  66  10   0   0  10
C |  10  64  96  10   0
G |  10  12   0   1  86
T |  10  10   0  85   0
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updated Mon Dec 18 09:07:40 2023