3rkq_AB : 3D-footprint complex

structure name	NKX2.5 HOMEODOMAIN DIMER BOUND TO ANF-242 DNA
reference	Kasahara et al. Biochemistry 51 6312 2012
source	Homo sapiens
experiment	X-ray (resolution=1.70, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	3rkq_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3rkq_A interface=6,48,51,52,55,56, grrkpRvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYKsk > 3rkq_B interface=6,48,51,52,55, grrkpRvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYks
interface signature	RIQNYK/RIQNY

Estimated binding specificities ?

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# IC=14.302 IC/col=0.753 n_of_columns=19

specificity:

A |   2   0  74  96   0  93   2  24  24  24  24  24   0  71   0   0   2   2  82
C |  10  84  12   0   0   0   4  24  24  24  24  24  90   8  96   0  10  90   4
G |   2   2  10   0  96   0  90  24  24  24  24  24   2  12   0   0   5   2  10
T |  82  10   0   0   0   3   0  24  24  24  24  24   4   5   0  96  79   2   0

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updated Fri Dec 15 16:45:27 2023