3or3_AB : 3D-footprint complex

structure name	RESTRICTION ENDONUCLEASE HPY188I IN COMPLEX WITH PRODUCT DNA
reference	Sokolowska et al. 'Nucleic 39 1554 2011
source	Helicobacter pylori
experiment	X-ray (resolution=1.95, R-factor=?)
reference complex	3oqg_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3or3_A interface=87,89,90,93,95,98,103,104,105,106,107,108, hefmakrksdiilksvddlkdeidykdfeykeyfnllcelvpnnslekleinaideknmkneglvyvfviqgkifkighsitpitkRvQSynCgKveYrkngTCSTTNyfvlqsllkinkivqvyaffpeqptytlfgktyqdsfstskraenvilenfiknhnkkpigctqt > 3or3_B interface=86,87,89,90,93,98,103,104,105,106,107,108,172, hefmakrksdiilksvddlkdeidykdfeykeyfnllcelvpnnslekleinaideknmkneglvyvfviqgkifkighsitpitKRvQSynCgkveYrkngTCSTTNyfvlqsllkinkivqvyaffpeqptytlfgktyqdsfstskraenvilenfiknhnkkpigctQt
interface signature	RQSCKYTCSTTN/KRQSCYTCSTTNQ

Estimated binding specificities ?

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# IC=9.667 IC/col=1.074 n_of_columns=9

specificity:

A |  12  96   0   0   0   0  96  96  24
C |  12   0   0  96   0   0   0   0  48
G |  24   0   0   0   0  96   0   0  12
T |  48   0  96   0  96   0   0   0  12

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updated Fri Dec 15 16:20:29 2023