interface graph thumbnail
legend  pdf

structure nameRESTRICTION ENDONUCLEASE HPY188I IN COMPLEX WITH SUBSTRATE DNA
(HPY188I)
referenceSokolowska et al. 'Nucleic 39 1554 2011
sourceHELICOBACTER PYLORI
experimentX-ray (resolution=1.75, R-factor=0.166)
multimeric complexes3oqg_AB 3or3_AB
redundant complexes3or3_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRQSCYTCSTTNQ

Estimated binding specificities ?

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# IC=4.860 IC/col=0.972 n_of_columns=5 specificity:   
A |   0   0   0   0  39
C |   0   0   0  76  19
G |  96   0   0   1  19
T |   0  96  96  19  19
scan!

Related DNA sequences reported in the literature ?


sitesourcematches (E-value)
term: HPY188I
TCNGAPubMed3oqg_AB(2.91e-03)

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updated Tue Dec 19 07:57:37 2023