interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF OKRAI/DNA COMPLEX
referenceAggarwal et al. 'Nucleic 39 712 2011
sourceOceanobacter kriegii
experimentX-ray (resolution=2.30, R-factor=?)
structural superfamilyRestriction endonuclease-like;
reference complex3odh_F
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNRYTDRVDR/NSRRYTDRE

Estimated binding specificities ?

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# IC=8.602 IC/col=1.075 n_of_columns=8 specificity:   
A |  16   0   0  96   0   0   0  80
C |  16   0   0   0   0  96  96   0
G |  16  96  80   0   0   0   0  16
T |  48   0  16   0  96   0   0   0
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updated Fri Dec 15 16:18:58 2023