3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


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updated Mon Dec 18 08:22:48 2023
structure nameSTRUCTURAL INSIGHT INTO THE SEQUENCE-DEPENDENCE OF NUCLEOSOME POSITIONING
(HISTONE H2A)
referenceVasudevan et al. Structure 18 528 2010
sourceXENOPUS LAEVIS
experimentX-ray (resolution=2.95, R-factor=0.231)
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes1kx3_ABCDEFGH 1kx4_ABCDEFGH 1kx5_ABCDEFGH 3b6f_ABCDEFGH 3b6g_ABCDEFGH 3lel_ABCDEF 3lel_GH 3lel_KLMOPQR 3o62_ABCDEFGH 4j8u_ABCDEFGH 4j8v_ABCDEFGH 4j8w_ABCDEFGH 4j8x_ABCDEFGH 4xuj_ABCDEFGH 5cp6_ABCDEFGH 5dnm_ABCDEFGH 5dnn_ABCDEFGH 5xf6_ABCDEFGH
reference complex1kx5_G
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence