interface graph thumbnail
legend  pdf

structure nameAN EXTRAORDINARY MECHANISM OF DNA PERTURBATION EXHIBITED BY THE RARE- CUTTING HNH RESTRICTION ENDONUCLEASE PACI
(restriction endonuclease PacI)
referenceStoddard et al. Structure 18 734 2010
sourcePseudomonas alcaligenes
experimentX-ray (resolution=1.97, R-factor=0.186)
structural superfamilyFYVE/PHD zinc finger;
reference complex3m7k_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSMQNYNKERNPRYFR

Estimated binding specificities ?

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# IC=3.474 IC/col=0.695 n_of_columns=5 specificity:   
A |   4  77  95  10  20
C |   2   1   0  13  42
G |   2  17   1  61  13
T |  88   1   0  12  21
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updated Mon Dec 18 08:22:43 2023