interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF PACI-DNA ENZYME PRODUCT COMPLEX
(RESTRICTION ENDONUCLEASE PACI)
referenceStoddard et al. Structure 18 734 2010
sourcePSEUDOMONAS ALCALIGENES
experimentX-ray (resolution=1.92, R-factor=0.173)
structural superfamilyFYVE/PHD zinc finger;
redundant complexes3ldy_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRSMMQNYNKERNPRYFR

Estimated binding specificities ?

contactlogo
# IC=5.542 IC/col=0.924 n_of_columns=6 specificity:   
A |  14  21   0   0   0  96
C |  14  21  96   0   0   0
G |  52  33   0   0   0   0
T |  16  21   0  96  96   0
scan!

home
updated Tue Dec 19 07:49:42 2023