interface graph thumbnail
legend  pdf

structure nameMUTM INTERROGATING AN EXTRAHELICAL G
(DNA glycosylase)
referenceVerdine et al. J.Biol.Chem. 285 1468 2010
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=2.60, R-factor=0.193)
structural superfamilyN-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain;Glucocorticoid receptor-like DNA-binding domain;
sequence familyFormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2; Zinc finger found in FPG and IleRS;
reference complex3u6p_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRMRFR

Estimated binding specificities ?

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# IC=2.931 IC/col=0.586 n_of_columns=5 specificity:   
A |  96  24   0  14  19
C |   0  24   0  14  38
G |   0  24  96  14  20
T |   0  24   0  54  19
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updated Mon Dec 18 08:09:38 2023