3c0x_A : 3D-footprint complex

structure name	I-SCEI IN COMPLEX WITH A TOP NICKED DNA SUBSTRATE (Intron-encoded endonuclease I-SceI)
reference	Quiocho et al. 'Nucleic 36 3287 2008
source	Saccharomyces cerevisiae
experiment	X-ray (resolution=2.30, R-factor=0.255)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG DNA endonuclease family;
reference complex	3c0w_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3c0x_A interface=12,13,44,46,48,57,59,84,86,88,94,96,100,147,148,149,150,161,163,190,191, nikknqvmnlgPNskllkeyksqlielnieqfeagiglilgdaYiRsRdegktycmQfEwknkaymdhvcllydqwvlspphkKeRvNhlgnlViTwgaQtfkhqafnklanlfivnnkktipnnlvenyltpmslaywfmddggkWDYNknstnksivlNtQsftfeeveylvkglrnkfqlncyvkiNKnkpiiyidsmsylifynlikpylipqmmyklp
interface signature	PNYRRQEKRNVTQWDYNNQNK

Estimated binding specificities ?

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# IC=18.563 IC/col=0.977 n_of_columns=19

specificity:

A |  92   6   6  82   0   0   0   0   0   0  24  24   5   0   0   8   0  96   6
C |   0   5   6   5  96  96  96   0   0   4  24  24   3  96  96  17   0   0   9
G |   3   3   6   3   0   0   0   0  96   3  24  24   3   0   0   3   0   0  78
T |   1  82  78   6   0   0   0  96   0  89  24  24  85   0   0  68  96   0   3

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updated Mon Dec 18 07:40:16 2023