2wbu_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE ZINC FINGER DOMAIN OF KLF4 BOUND TO ITS TARGET DNA (KRUEPPEL-LIKE FACTOR 4)
reference	Carstanjen et al. 'Cell.Mol.Life 68 3121 2011
source	MUS MUSCULUS
experiment	X-ray (resolution=2.50, R-factor=0.220)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	2wbs_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2wbu_A interface=15,17,18,45,46,47,48,51,73,75,76, thtcdyagcgktytKsSHlkahlrthtgekpyhcdwdgcgwkfaRSDEltRhyrkhtghrpfqcqkcdrafsRsDHlalhmkrhf
interface signature	KSHRSDERRDH

Estimated binding specificities ?

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# IC=10.239 IC/col=1.024 n_of_columns=10

specificity:

A |   7  59   0   0   0   0   7   0   0   7
C |   7   7   0   0  96   0   1   0   0  66
G |  66  22  96  96   0  96   0  96  96   9
T |  16   8   0   0   0   0  88   0   0  14

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updated Mon Dec 18 07:19:44 2023