2ve9_AF : 3D-footprint complex

structure name	XRAY STRUCTURE OF KOPS BOUND GAMMA DOMAIN OF FTSK (P. AERUGINOSA)
reference	Sherratt et al. Mol.Cell 31 498 2008
source	PSEUDOMONAS AERUGINOSA
experiment	X-ray (resolution=1.90, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	2ve9_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2ve9_A interface=21,24,31,32, ddplydeavrfvtesrrasiSavQrklkigYNraarmieamemagvvtpmntngsreviapa > 2ve9_F interface=25,32, eddplydeavrfvtesrrasisavQrklkigYnraarmieamemagvvtpmntngsreviapa
interface signature	SQYN/QY

Estimated binding specificities ?

readout + contact

# IC=4.236 IC/col=0.353 n_of_columns=12

specificity:

A |   0   0  48  24  24  24  24  24  24  24   0  12
C |  72  84  24  24  24  24  24  24  24  24   0   0
G |   0   0  12  24  24  24  24  24  24  24  96  84
T |  24  12  12  24  24  24  24  24  24  24   0   0

scan!

home
updated Fri Dec 15 12:56:06 2023