2vbn_AB : 3D-footprint complex

structure name	MOLECULAR BASIS OF HUMAN XPC GENE RECOGNITION AND CLEAVAGE BY ENGINEERED HOMING ENDONUCLEASE HETERODIMERS
reference	Cabaniols et al. Nature 456 107 2008
source	CHLAMYDOMONAS REINHARDTII
experiment	X-ray (resolution=1.90, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B 2vbl_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2vbn_A interface=22,24,26,28,32,38,44,46,66,68,70,72,73,75,139,140, mntkynkefllylagfvdgdgSiIaQiKpnqSskfkhRlsltfQvTqktqrrwfldklvdeigvgYvRdSgSVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 2vbn_B interface=21,23,25,27,29,31,32,37,39,43,45,67,69,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiEpNqSYkfkhRlKltfKvTqktqrrwfldklvdeigvgyvSdSgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SIQKSRQTYRSSVNKT/SIQENSYRKKTSSVNKT

Estimated binding specificities ?

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# IC=19.286 IC/col=0.918 n_of_columns=21

specificity:

A |   0   0  24   0   0   0   0   2  13  24  24  53  56   0   0  94   5   0   0   0  96
C |   4   0  24  96   0   0   0  20  16  24  24  18   3   0   0   0   2  96  96   0   0
G |   2  96  24   0   0   0   0   2  13  24  24  13  32  96  96   2   8   0   0   0   0
T |  90   0  24   0  96  96  96  72  54  24  24  12   5   0   0   0  81   0   0  96   0

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updated Fri Dec 15 12:55:31 2023