2vbl_AB : 3D-footprint complex

structure name	MOLECULAR BASIS OF HUMAN XPC GENE RECOGNITION AND CLEAVAGE BY ENGINEERED HOMING ENDONUCLEASE HETERODIMERS
reference	Cabaniols et al. Nature 456 107 2008
source	CHLAMYDOMONAS REINHARDTII
experiment	X-ray (resolution=1.80, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B 2vbl_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2vbl_A interface=21,23,25,27,29,31,32,37,39,43,45,67,69,71,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiEpNaSYkfkhRlKltfKvTqktqrrwfldklvdeigvgyvRdEgSVsNyilseikplrnfltqlqpflklkqkqanlvlkiteqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 2vbl_B interface=21,23,25,29,31,37,39,43,45,65,69,71,72,74,138,139, ntkynkefllylagfvdadgSiIaQiapNqSskfkhRlKltfQvTqktqrrwfldklvdeigvgYvrgSgSVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SIQENSYRKKTRESVNKT/SIQNSRKQTYSSVNKT

Estimated binding specificities ?

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# IC=20.922 IC/col=0.996 n_of_columns=21

specificity:

A |   0   7   0  80   0   0   0   3  11  24  24  65  76   0   0  96   0   0   0   0  96
C |   0   0  96   7   3   3   0  14  11  24  24  17   3   0   0   0   0  96  96   0   0
G |   0  88   0   6   1   0   0   3  11  24  24   7  11  96  96   0   0   0   0   0   0
T |  96   1   0   3  92  93  96  76  63  24  24   7   6   0   0   0  96   0   0  96   0

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updated Fri Dec 15 12:55:15 2023