2v6e_AB : 3D-footprint complex

structure name	PROTELOMERASE TELK COMPLEXED WITH SUBSTRATE DNA
reference	Ellenberger et al. Mol.Cell 27 901 2007
source	KLEBSIELLA PHAGE PHIKO2
experiment	X-ray (resolution=3.20, R-factor=?)
reference complex	2v6e_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2v6e_A interface=61,62,64,65,66,68,69,209,213,216,256,297,299,347,354,355,358,359,362,415,418,421,486,489,495,496, vkigelinslvseveaidasdrpqgdktkkikaaalkyknalfndkrkfrgkglekrisaNTfNSYmSRarkrfddrlhhnfeknviklsekyplyseelsswlsmpaasirqhmsrlqaklkeimplaedlsnikigtknseakinklankypewqfaisdlnsedwkdkrdylyklfqqgsslledlnnlkvnhevlyhlqlssaeRtsiQqrWanvlsekkrnvvvidyprymqaiydiinkpivsfdlttrRgmaplafalaalsgrrmieimlqgefsvagkytvtflgqaKkRsedkgisrkiytlcdatlfvslvnelrscpaaadfdevikgygendtRsengriNAilATafNpwvktflgddrrvykdsraiyariayemffrvdprwknvdedvffmeilghdDenTqlHykqfklanfsrtwrpnvgeenarlaalqkldsmmpdfargdagvrihetvkqlveqdpsikitnStlRpfnfsTRliprylefaadalgqfvgengqwqlkdeapaivlp > 2v6e_B interface=61,62,64,65,66,68,69,209,213,216,256,297,299,347,354,355,358,359,362,415,418,421,486,489,495,496, vkigelinslvseveaidasdrpqgdktkkikaaalkyknalfndkrkfrgkglekrisaNTfNSYmSRarkrfddrlhhnfeknviklsekyplyseelsswlsmpaasirqhmsrlqaklkeimplaedlsnikigtknseakinklankypewqfaisdlnsedwkdkrdylyklfqqgsslledlnnlkvnhevlyhlqlssaeRtsiQqrWanvlsekkrnvvvidyprymqaiydiinkpivsfdlttrRgmaplafalaalsgrrmieimlqgefsvagkytvtflgqaKkRsedkgisrkiytlcdatlfvslvnelrscpaaadfdevikgygendtRsengriNAilATafNpwvktflgddrrvykdsraiyariayemffrvdprwknvdedvffmeilghdDenTqlHykqfklanfsrtwrpnvgeenarlaalqkldsmmpdfargdagvrihetvkqlveqdpsikitnStlRpfnfsTRliprylefaadalgqfvgengqwqlkdeapaivlp
interface signature	NTNSYSRRQWRKRRNAATNDTHSRTR/NTNSYSRRQWRKRRNAATNDTHSRTR

Estimated binding specificities ?

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# IC=34.482 IC/col=0.784 n_of_columns=44

specificity:

A |   2  96   0  93  24  24  24  24  24   7  24   5   1  96   0   0  90   0  96   1   0  24  24   1   1   0  96   3  96  96   0   1  10  24  11  24  24  24  24  24   1   0   0   3
C |  88   0  96   1  24  24  24  24  24   9  24  80  76   0   0   0   3   0   0  90   1  24  24  95   5   0   0   1   0   0   0   1   3  24  67  24  24  24  24  24   1   0   0   0
G |   1   0   0   1  24  24  24  24  24  71  24   5  18   0   0   0   3   0   0   5  92  24  24   0  90   0   0   0   0   0   0  94  82  24   9  24  24  24  24  24   4  96   0  93
T |   5   0   0   1  24  24  24  24  24   9  24   6   1   0  96  96   0  96   0   0   3  24  24   0   0  96   0  92   0   0  96   0   1  24   9  24  24  24  24  24  90   0  96   0

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updated Fri Dec 15 12:53:38 2023