2pvi_AB : 3D-footprint complex

structure name	PVUII ENDONUCLEASE COMPLEXED TO AN IODINATED COGNATE DNA
reference	Horton et al.
source	Proteus vulgaris
experiment	X-ray (resolution=1.76, R-factor=?)
structural superfamily	Restriction endonuclease-like;
reference complex	3pvi_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2pvi_A interface=33,76,80,83,139,140,142, shpdlnkllelwphiqeyqdlalkhgindifqDnggkllqvllitgltvlpgragndavdnagqeyelksinidlTkgfSthHhmnpviiakarqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy > 2pvi_B interface=33,80,83,139,140,142, shpdlnkllelwphiqeyqdlalkhgindifqDnggkllqvllitgltvlpgragndavdnagqeyelksinidltkgfSthHhmnpviiakarqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy
interface signature	DTSHNNK/DSHNNK

Estimated binding specificities ?

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# IC=8.745 IC/col=0.972 n_of_columns=9

specificity:

A |   6   6   0  96   6   6   0   0   6
C |   6  78  96   0   6  78   0   0   6
G |   6   6   0   0  78   6   0  96  78
T |  78   6   0   0   6   6  96   0   6

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updated Fri Dec 15 12:45:18 2023