2hdd_AB : 3D-footprint complex

structure name	ENGRAILED HOMEODOMAIN Q50K VARIANT DNA COMPLEX
reference	Tucker-Kellogg et al. Structure 5 1047 1997
source	Drosophila melanogaster
experiment	X-ray (resolution=1.90, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	2hdd_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2hdd_A interface=1,42,43,46,47, RtafsseqlarlkrefnenrylterrrqqlsselglneaqiKIwfKNkrakikks > 2hdd_B interface=46,49,50, krprtafsseqlarlkrefnenrylterrrqqlsselglneaqikIwfKNkrakik
interface signature	RKIKN/IKN

Estimated binding specificities ?

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# IC=10.050 IC/col=0.838 n_of_columns=12

specificity:

A |   0   0  13  24  24   0   0  54   0   0  96  13
C |   6  96  57  24  24   0   0  13   0   0   0  68
G |   0   0  13  24  24  96  96  13   0   0   0   6
T |  90   0  13  24  24   0   0  16  96  96   0   9

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updated Fri Dec 15 11:59:16 2023