2hap_D : 3D-footprint complex

structure name	STRUCTURE OF A HAP1-18/DNA COMPLEX REVEALS THAT PROTEIN/DNA INTERACTIONS CAN HAVE DIRECT ALLOSTERIC EFFECTS ON TRANSCRIPTIONAL ACTIVATION (PROTEIN HEME ACTIVATOR PROTEIN)
reference	Marmorstein et al. Nat.Struct.Biol. 6 22 1999
source	Saccharomyces cerevisiae
experiment	X-ray (resolution=2.50, R-factor=0.248)
structural superfamily	Leucine zipper domain;Zn2/Cys6 DNA-binding domain;
sequence family	Fungal Zn2Cys6 binuclear cluster domain;
multimeric complexes	1hwt_CD 1hwt_GH 1qp9_AB 1qp9_CD 2hap_CD
reference complex	1hwt_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2hap_D interface=2,4,8,15,16,17, kRnRiplRcticrkRKVkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektlsk
interface signature	RRRRKV

Estimated binding specificities ?

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# IC=7.738 IC/col=0.860 n_of_columns=9

specificity:

A |  75   0  96  66  24  61   0   0   0
C |   7   0   0   7  24  14   0  96   7
G |   7   0   0  14  24   7  96   0  88
T |   7  96   0   9  24  14   0   0   1

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updated Mon Dec 18 06:47:47 2023