1hwt_CD : 3D-footprint complex

structure name	STRUCTURE OF A HAP1/DNA COMPLEX REVEALS DRAMATICALLY ASYMMETRIC DNA BINDING BY A HOMODIMERIC PROTEIN
reference	Marmorstein et al. Nat.Struct.Biol. 6 64 1999
source	Saccharomyces cerevisiae
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	Zn2/Cys6 DNA-binding domain;
reference complex	1hwt_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1hwt_C interface=12,13,14, riplscticrkRKVkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektl > 1hwt_D interface=3,5,17, rkRnRiplscticrkrKvkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektl
interface signature	RKV/RRK

Estimated binding specificities ?

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# IC=10.999 IC/col=0.917 n_of_columns=12

specificity:

A |   0   0   0  24  24  24   0  96   0   0   0  12
C |  96   0  96  24  24  12   0   0   0  96   0  48
G |   0  96   0  24  24  12   0   0   0   0  96  24
T |   0   0   0  24  24  48  96   0  96   0   0  12

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updated Fri Dec 15 09:10:38 2023