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3D-footprint cannot reliably estimate the specificity of 'DNA polymerase beta, N-terminal domain-like', as these often contain single-stranded DNA molecules which accumulate many base contacts which distort the calculations.


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updated Mon Dec 18 06:45:31 2023
structure nameDNA POLYMERASE BETA WITH A TERMINATED GAPPED DNA SUBSTRATE AND DDCTP WITH SODIUM IN THE CATALYTIC SITE
(DNA polymerase beta)
referencePedersen et al. Structure 14 757 2006
sourceHomo sapiens
experimentX-ray (resolution=1.65, R-factor=0.179)
structural superfamilyNucleotidyltransferase;DNA polymerase beta, N-terminal domain-like;DNA polymerase beta-like, second domain;
sequence familyFingers domain of DNA polymerase lamb;
redundant complexes7ics 1tv9 7ict 1zqr 9icy 9icj 3gdx 7icg 4dob 2isp 7icp 4doc 3jpo 7ici 1zqd 4f5p 2p66 8ics 8icq 8icz 8icb 7icf 9icp 1zqj 8icy 1bpy 2bpf 1zqh 3rjh 9icl 1huo 4f5q 4f5r 8ice 7icl 7ich 9icm 3jpt 1zqg 1zqt 3rh4 1zqi 1zqa 9ice 3jpr 8icv 2fmq 9icu 1mq2 3rjf 7icv 1zqf 9ici 8icw 1zqo 2iso 8icm 3isd 7icn 7icr 3isb 1tva 1zqn 3jps 1huz 4do9 8icf 9icn 4jwm 1zqe 3rje 7ick 3uxp 4gxj 1zjm 9icb 8ico 3rji 1mq3 3tfs 4jwn 3mby 4gxi 3jpn 7ice 2fms 4gxk 9icv 8icx 9icx 3v72 8ica 2bpg 8icp 1zqp 3jpq 9ica 3rh6 3c2l 9ics 9icw 3c2m 1bpz 8icj 9icr 9ict 1zjn 4f5n 3rjg 8ici 9icg 7icu 7icq 1zqm 4doa 1zqq 1zqk 7ico 3isc 8ict 1zqs 3rjj 1zqc 8ich 7icm 8ick 4f5o 8icu 8icg 3rjk 8icr 8icl 7icj 9ico 3tfr 3c2k 2pxi 1zql 9ich 9icf 8icc 9icq 3ogu 2i9g 9icc 3jpp 8icn 1bpx 3lk9 1zqb 3rh5 9ick
reference complex4kli_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence