2ex5_AB : 3D-footprint complex

structure name	GROUP I INTRON-ENCODED HOMING ENDONUCLEASE I-CEUI COMPLEXED WITH DNA
reference	Stoddard et al. Structure 14 869 2006
source	Chlamydomonas eugametos
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	2ex5_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2ex5_A interface=64,66,68,70,72,82,84,86,88,110,112,113,124,188,191,193, ilkpgeklpqdkleelkkindavkktknfskylidlrklfqidevqvtsesklflagflegeaSlNiStKkLatskfglvvDpEfNvTrhvngvkvlylalevfktgriRhKSgsnatlvltiDnrqsleekvipfyeqyvvafsspekvkrvanfkallelfnndahqdleqlvnkilpiwdqmrkQqgQsNegfpnleaaqdfar > 2ex5_B interface=66,68,70,72,74,84,86,88,110,112,113,118,124,188, ilkpgeklpqdkleelkkindavkktknfskylidlrklfqidevqvtsesklflagflegeaslNiStKkLaTskfglvvdpEfNvTrhvngvkvlylalevfktgriRhKSgsnaTlvltiDnrqsleekvipfyeqyvvafsspekvkrvanfkallelfnndahqdleqlvnkilpiwdqmrkQqgqsnegfpnleaaqdfar
interface signature	SNSKLDENTRKSDQQN/NSKLTENTRKSTDQ

Estimated binding specificities ?

readout + contact

# IC=19.050 IC/col=1.058 n_of_columns=18

specificity:

A |   0  15  90   0   0   0   0   0  82   1  88  36   0   0   5  78   0   3
C |   0  77   0  96   0   0   0  96  13   3   1   3   0   0  17   7   0  77
G |   0   1   5   0  96  96   0   0   0   4   4   3  96  96   7   7  96   3
T |  96   3   1   0   0   0  96   0   1  88   3  54   0   0  67   4   0  13

scan!

home
updated Fri Dec 15 11:48:15 2023