1zr2_A : 3D-footprint complex

structure name	STRUCTURE OF A SYNAPTIC GAMMA-DELTA RESOLVASE TETRAMER COVALENTLY LINKED TO TWO CLEAVED DNAS (Transposon gamma-delta resolvase)
reference	Grindley et al. Science 309 1210 2005
source	Escherichia coli
experiment	X-ray (resolution=3.90, R-factor=0.270)
structural superfamily	Resolvase-like;Homeodomain-like;
sequence family	Resolvase, N terminal domain; Helixturnhelix domain of resolvase;
multimeric complexes	1gdt_AB
reference complex	1gdt_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1zr2_A interface=130,142,171,172,173,174,176,177, malfgyarvstsqqsldiqvralkdagvkanriftdkasgsssdrkgldllrmkvkegdvilvkkldrlgrdtadmiqlikefdaqgvsirfiddgistdsyigkmvvtilsavaqaerqrilqrtnegRqeamakgvvfgRkrkidrdavlnmwqqglgashisktmniARSTvYKvinesn
interface signature	RRARSTYK

Estimated binding specificities ?

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# IC=10.912 IC/col=0.992 n_of_columns=11

specificity:

A |  96  12   0  84  24   0   0  12  96   0  96
C |   0  12   0   0  24  96   0  12   0  96   0
G |   0  12   0   0  24   0  96  60   0   0   0
T |   0  60  96  12  24   0   0  12   0   0   0

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updated Mon Dec 18 06:31:06 2023