interface graph thumbnail
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structure nameYEAST TFIIA/TBP/DNA COMPLEX
(PROTEIN TATA BINDING PROTEIN TBP)
referenceRichmond et al. Nature 381 127 1996
sourceSACCHAROMYCES CEREVISIAE
experimentX-ray (resolution=2.50, R-factor=0.235)
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
multimeric complexes1nh2_AC 1ytf_AC 4v1n_ABMO 4v1o_ABMO 5fmf_1AMPQUV
reference complex1ytb_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFLFVTNVFPLFVT

Estimated binding specificities ?

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# IC=10.224 IC/col=1.022 n_of_columns=10 specificity:   
A |   9   0   7   1   1  73   0  96   0  96
C |   7   0   7   7   0   9   0   0   0   0
G |  73   0   7   7   7   7   0   0   0   0
T |   7  96  75  81  88   7  96   0  96   0
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updated Mon Dec 18 06:19:56 2023