1w0t_AB : 3D-footprint complex

structure name	HTRF1 DNA-BINDING DOMAIN IN COMPLEX WITH TELOMERIC DNA.
reference	Chapman et al. 'Embo 6 39 2005
source	HOMO SAPIENS
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	1w0t_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1w0t_A interface=2,39,40,43,44,47, kRqawlweedknlrsgvrkygegnwskillhykfnnrtSVmlKDrwRtmkkl > 1w0t_B interface=2,39,40,43,44,47, kRqawlweedknlrsgvrkygegnwskillhykfnnrtSVmlKDrwRtmkkl
interface signature	RSVKDR/RSVKDR

Estimated binding specificities ?

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# IC=12.331 IC/col=1.028 n_of_columns=12

specificity:

A |  68   0   0   0  74  18  70   0   0   2   0   0
C |   4   0   0   0  18   1  18   0   0   4   4   4
G |  18  96  96  96   0   4   4  96  96  86   1   0
T |   6   0   0   0   4  73   4   0   0   4  91  92

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updated Fri Dec 15 11:15:24 2023