1s9k_CDE : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HUMAN NFAT1 AND FOS-JUN ON THE IL-2 ARRE1 SITE
reference	Stroud et al. 'To ? ? ?
source	HOMO SAPIENS
experiment	X-ray (resolution=3.10, R-factor=?)
structural superfamily	p53-like transcription factors;E set domains;A DNA-binding domain in eukaryotic transcription factors;"Winged helix" DNA-binding domain;Leucine zipper domain;
reference complex	1p7h_L 2wt7_A 3qrf_G 5t01_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1s9k_C interface=23,26,29,32,139,173,174, wplssqsgsyelrievqpkphhRahYetEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQRsahelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv > 1s9k_D interface=4,8,11,12,16, rriRrerNkmAAakcRnrrreltdtlqaetdqledeksalqteianllkekek > 1s9k_E interface=6,9,13,14, rkrmrNriAaskCRkrkleriarleekvktlkaqnselastanmlreqvaql
interface signature	RYERRQR/RNAAR/NACR

Estimated binding specificities ?

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# IC=12.168 IC/col=0.811 n_of_columns=15

specificity:

A |   0   0  96  58  24  80  24  24  10   6   0   0  10  96  96
C |   5   0   0  10  24   5  24  24   5   0   0   0   7   0   0
G |   6  96   0  16  24   5  24  24  10  90   0  96   5   0   0
T |  85   0   0  12  24   6  24  24  71   0  96   0  74   0   0

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updated Fri Dec 15 11:00:40 2023