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structure nameCRYSTAL STRUCTURE OF THE C(-29) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
(TRANSCRIPTION INITIATION FACTOR TFIID-1)
referencePatikoglou et al. 'Genes 13 3217 1999
sourceARABIDOPSIS THALIANA
experimentX-ray (resolution=1.90, R-factor=0.209)
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
multimeric complexes1vol_AB
reference complex1qna_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFLFVTNVFPLFVT

Estimated binding specificities ?

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# IC=6.915 IC/col=0.988 n_of_columns=7 specificity:   
A |   0  12   0   0  12   0  60
C |   0  12   0   0   0   0  12
G |   0  12   0   0  84   0  12
T |  96  60  96  96   0  96  12
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updated Mon Dec 18 05:53:41 2023