interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A YEAST BRF1-TBP-DNA TERNARY COMPLEX
(TRANSCRIPTION INITIATION FACTOR TFIID)
referenceKassavetis et al. Nature 422 534 2003
sourceSACCHAROMYCES CEREVISIAE
experimentX-ray (resolution=2.95, R-factor=0.278)
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
multimeric complexes1nh2_AC 1ytf_AC 4v1n_ABMO 4v1o_ABMO 5fmf_1AMPQUV
reference complex1ytb_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFLFVTNVFPLFVT

Estimated binding specificities ?

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# IC=7.099 IC/col=1.014 n_of_columns=7 specificity:   
A |   0  96  16  96  96  54  96
C |   0   0  13   0   0  13   0
G |   0   0  13   0   0  16   0
T |  96   0  54   0   0  13   0
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updated Mon Dec 18 05:28:28 2023