1mey_CF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A DESIGNED ZINC FINGER PROTEIN BOUND TO DNA
reference	Berg et al.
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	C2H2 and C2HC zinc fingers;
reference complex	1mey_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1mey_C interface=15,17,18,21,43,44,45,46,49,71,73,74,77, ekpykcpecgksfsQsSNlqKhqrthtgekpykcpecgksfsQSSDlqKhqrthtgekpykcpecgksfsRsDHlsRhqrthq > 1mey_F interface=16,18,19,22,44,45,46,47,50,72,74,75,78, mekpykcpecgksfsQsSNlqKhqrthtgekpykcpecgksfsQSSDlqKhqrthtgekpykcpecgksfsRsDHlsRhqrthq
interface signature	QSNKQSSDKRDHR/QSNKQSSDKRDHR

Estimated binding specificities ?

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# IC=24.998 IC/col=1.087 n_of_columns=23

specificity:

A |   8   0   0   0   0   0   0   0   0   0  96  24  24  27   0   0   0   0   0   0   0  17  27
C |   1   0   0  96   0   0  96  96   8  96   0  24  24   0   0   0  96   0   0  96  96  19  69
G |  87   0   0   0   0  96   0   0   0   0   0  24  24  69   0   0   0   0  96   0   0  17   0
T |   0  96  96   0  96   0   0   0  88   0   0  24  24   0  96  96   0  96   0   0   0  43   0

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updated Fri Dec 15 09:46:24 2023