| structure name | ESTROGEN RELATED RECEPTOR 2 DNA BINDING DOMAIN IN COMPLEX WITH DNA (STEROID HORMONE RECEPTOR ERR2) |
| source | HOMO SAPIENS |
| experiment | NMR |
| structural superfamily | Glucocorticoid receptor-like DNA-binding domain; |
| sequence family | Zinc finger, C4 type two domains; |
| multimeric complexes | 8ifo_AB |
| redundant complexes |  8ifo_A
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | HEAKAKRRR |
Estimated binding specificities ?
| contact |  |
A | 13 24 96 0 0 0 24 0 96 16 C | 13 24 0 96 96 0 24 0 0 13 G | 16 24 0 0 0 0 24 96 0 54 T | 54 24 0 0 0 96 24 0 0 13scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: ESTROGEN RECEPTOR | ||
| GGTGACCTTGACC | PubMed | 1lo1_A(1.43e-03) |
| CATAACCTTGACC | PubMed | 1lo1_A(1.43e-03) |
| TNAAGGTCA | PubMed | 1lo1_A(7.43e-03) |
Dendrogram of similar interfaces ?
matrix formatECKG--KGRG--RCRC L +--------------------------2ff0_A ! EAKG--RTRTRT---- ! +----4umm_E ! +---7 --KGVT--RG------ ! ! ! +1r4i_A ! ! +---6 ETKGAT--RG------ L ! ! ! +1lat_A ! +---9 +-4 ECKG--RGRG------ L +-12 ! ! +3dzy_D ! ! ! ! ECKG--KGRG------ L ! ! ! ! +1ynw_B ! ! +--10 +--------2 ECKG--RGRG------ L ! ! ! ! +5uan_B ! ! ! ! EAKG--KTRG------ L ! ! ! ! +2han_A ! ! ! ! +----1 ECKG--RGRG------ L ! +--------11 +-------8 +2nll_B -13 ! ! ECKG--KTRG------ L ! ! +----2nll_A ! ! --KGVT--RG------ L ! ! +5cbz_E ! +---------------5 DGKG--RTRG------ L ! ! +3cbb_A ! +-3 ECKG--KGRG------ ! +3dzy_A ! ECKA--RGRG------ L +-----------------------------4nqa_I |
home
updated Tue Dec 19 05:53:12 2023