1ihf_AB : 3D-footprint complex

structure name	INTEGRATION HOST FACTOR/DNA COMPLEX
reference	Mizuuchi et al. 'Cell(Cambridge,Mass.)' 87 1295 1996
source	ESCHERICHIA COLI
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	IHF-like DNA-binding proteins;
reference complex	1owf_A 1owf_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1ihf_A interface=59,62,63,64,65,72, altkaemseylfdklglskrdakelvelffeeirralengeqvklsgfgnfdlrdknqRpgRNPKtgedipItarrvvtfrpgqklksrvenaspk > 1ihf_B interface=46,59,62,63,64,65, mtkselierlatqqshipaktvedavkemlehmastlaqgerieiRgfgsfslhyrapRtgRNPKtgdkvelegkyvphfkpgkelrdraniyg
interface signature	RRNPKI/RRRNPK

Estimated binding specificities ?

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# IC=8.819 IC/col=0.519 n_of_columns=17

specificity:

A |  96  54  24  24  24  59   0   0   0  75  24  24  24  24  24  96  88
C |   0  14  24  24  24  14   0   0   0   7  24  24  24  24  24   0   1
G |   0  14  24  24  24  14   0   0  96   7  24  24  24  24  24   0   7
T |   0  14  24  24  24   9  96  96   0   7  24  24  24  24  24   0   0

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updated Fri Dec 15 09:14:36 2023