1if1_AB : 3D-footprint complex

structure name	INTERFERON REGULATORY FACTOR 1 (IRF-1) COMPLEX WITH DNA
reference	Escalante et al.
source	Mus musculus
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	1if1_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1if1_A interface=74,76,77,81, rmrpwlemqinsnqipgliwinkeemifqipwkhaakhgwdinkdaclfrswaihtgrykagekepdpktwkaNfRCamnSlpdieevkdqsrnkgssavrvyrm > 1if1_B interface=33,73,75,76,79,80, mrpwlemqinsnqipgliwinkeemifqipwkHaakhgwdinkdaclfrswaihtgrykagekepdpktwkaNfRCamNSlpdieevkdqsrnkgssavrvyrm
interface signature	NRCS/HNRCNS

Estimated binding specificities ?

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# IC=13.208 IC/col=0.777 n_of_columns=17

specificity:

A |   4  24  24   2   0  12  96  24  24   0  93  12   2   0  68   0  96
C |  88  24  24   0   0   4   0  24  24   2   0  59   7   0  14  96   0
G |   2  24  24   4  96  66   0  24  24   1   3  14   4   0   2   0   0
T |   2  24  24  90   0  14   0  24  24  93   0  11  83  96  12   0   0

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updated Fri Dec 15 09:13:52 2023