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legend  pdf

structure nameCRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
(RUNT-RELATED TRANSCRIPTION FACTOR 1)
referenceTahirov et al.
sourceMUS MUSCULUS
experimentX-ray (resolution=2.65, R-factor=0.223)
structural superfamilyp53-like transcription factors;
sequence familyRunt domain;
multimeric complexes3wu1_AB 4l18_AB 4l18_EF
reference complex4l18_E
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRVDRR

Estimated binding specificities ?

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# IC=7.393 IC/col=0.924 n_of_columns=8 specificity:   
A |   6   0   0   0   0  14   6  14
C |   6   0   0   0   0   6  14   6
G |   8  96   0  96  96  12   6  70
T |  76   0  96   0   0  64  70   6
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updated Mon Dec 18 05:09:52 2023