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legend  pdf

structure nameINTRON ENCODED HOMING ENDONUCLEASE I-PPOI (H98A)/DNA HOMING SITE COMPLEX
(INTRON-ENCODED HOMING ENDONUCLEASE I-PPOI)
referenceStoddard et al. Nat.Struct.Biol. 6 1096 1999
sourcePhysarum polycephalum
experimentX-ray (resolution=1.93, R-factor=0.204)
structural superfamilyHis-Me finger endonucleases;
multimeric complexes1a73_AB 1a74_AB 1cyq_AB 1cz0_AB 1evw_AB 1evw_CD 1ipp_AB 2o6m_AB
redundant complexes2o6m 1ipp 1a74 1cz0
reference complex1a73_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureANRQKTVRLK

Estimated binding specificities ?

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# IC=9.050 IC/col=0.905 n_of_columns=10 specificity:   
A |   0   0  24   0   0   0   8   8   8   0
C |   0   0  24  96   0  96  64  72   8   8
G |   0  96  24   0   0   0   8   8  16   0
T |  96   0  24   0  96   0  16   8  64  88
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updated Mon Dec 18 05:01:01 2023