1aay_A : 3D-footprint complex

structure name	ZIF268 ZINC FINGER-DNA COMPLEX (PROTEIN ZIF268 ZINC FINGER PEPTIDE)
reference	Elrod-Erickson et al.
source	Mus musculus
experiment	X-ray (resolution=1.60, R-factor=0.195)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
multimeric complexes	1p47_AB
reference complex	4x9j_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1aay_A interface=16,18,19,22,44,45,46,47,50,72,74,75,78, rpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlr
interface signature	RDERRSDHTRDER

Estimated binding specificities ?

readout + contact

# IC=11.267 IC/col=1.127 n_of_columns=10

specificity:

A |  48   0  16   0   0   0  96   0   0   0
C |  16  96   0  96  96  80   0  96   0  96
G |  16   0  80   0   0   0   0   0  96   0
T |  16   0   0   0   0  16   0   0   0   0

scan!

home
updated Mon Dec 18 04:56:32 2023