1p47_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF TANDEM ZIF268 MOLECULES COMPLEXED TO DNA
reference	Peisach et al.
source	Mus musculus
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	beta-beta-alpha zinc fingers;
reference complex	4x9j_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1p47_A interface=17,19,20,23,45,47,48,51,73,75,76,79, erpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRsDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlrq > 1p47_B interface=16,18,19,22,44,45,46,47,50,72,74,75,78, rpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRsDErkRhtkihl
interface signature	RDERRDHTRDER/RDERRSDHTRDER

Estimated binding specificities ?

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# IC=23.277 IC/col=1.164 n_of_columns=20

specificity:

A |   4   0   0   0   4   0   0   0   4   0   0   4   0   0   0   0   0   4   0   4
C |   6   0  92   0   4   0   0   0  82   0   0  82   0   0   0   0   0  84   0   4
G |  82  96   0  96   4  96  96  96   6  96  96   6  96   4  96  96  96   4  96   4
T |   4   0   4   0  84   0   0   0   4   0   0   4   0  92   0   0   0   4   0  84

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updated Fri Dec 15 10:41:47 2023