1a6y_AB : 3D-footprint complex

structure name	REVERBA ORPHAN NUCLEAR RECEPTOR/DNA COMPLEX
reference	Khorasanizadeh et al. Mol.Cell 1 849 1998
source	Homo sapiens
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	1a6y_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1a6y_A interface=14,21,24,28,29,76, llckvcgdvasgfHygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrFgr > 1a6y_B interface=24,27,31,32,81, gmvllckvcgdvasgfhygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrfgRipk
interface signature	HEKRRF/EKRRR

Estimated binding specificities ?

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# IC=11.687 IC/col=0.835 n_of_columns=14

specificity:

A |  79   0   0   1   0  70  16  24  24   0   0   8   0  75
C |   1   0   0   4  96   8  62  24  24   0   0  12  96   5
G |  16  96  96   4   0   8  10  24  24  96  96  10   0   8
T |   0   0   0  87   0  10   8  24  24   0   0  66   0   8

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updated Fri Dec 15 08:33:14 2023