DNA Binding Motif

Accessions: 2p5l_D (3D-footprint 20231221)
Names: Arginine repressor
Organisms: Bacillus subtilis, strain 168
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of a dimer of N-terminal domains of AhrC in complex with an 18bp DNA operator site
Length: 6
Consensus: aAtTCA
Weblogo:
PSSM: P0 A C G T
01 54 16 13 13 a
02 96 0 0 0 A
03 13 16 13 54 t
04 0 0 0 96 T
05 0 96 0 0 C
06 96 0 0 0 A
Binding TFs: 2p5l_D (Arginine repressor, DNA binding domain)
Binding Sites: 2p5l_A
2p5l_B
Publications: Garnett J.A, Marincs F, Baumberg S, Stockley P.G, Phillips S.E. Structure and function of the arginine repressor-operator complex from Bacillus subtilis. Journal of molecular biology 379:284-98 (2008). [Pubmed]

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