DNA Binding Motif

Accessions: 5yj3_D (3D-footprint 20231221)
Names: Telomere zinc finger-associated protein
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of TZAP and telomeric DNA complex
Length: 7
Consensus: rCCCTAr
Weblogo:
PSSM: P0 A C G T
01 48 12 24 12 r
02 0 96 0 0 C
03 0 96 0 0 C
04 0 96 0 0 C
05 0 0 0 96 T
06 96 0 0 0 A
07 48 12 24 12 r
Binding TFs: 5yj3_D (Zinc finger, C2H2 type, C2H2 type zinc-finger (2 copies), Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Sites: 5yj3_A
5yj3_B
Publications: Zhao Y, Zhang G, He C, Mei Y, Shi Y, Li F. The 11th C2H2 zinc finger and an adjacent C-terminal arm are responsible for TZAP recognition of telomeric DNA. Cell Res 28:130-134 (2018). [Pubmed]

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