interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF TZAP AND TELOMERIC DNA COMPLEX
(Telomere zinc finger-associated protein)
referenceZhao et al. 'Cell 28 130 2018
sourceHomo sapiens
experimentX-ray (resolution=2.85, R-factor=0.228)
structural superfamilybeta-beta-alpha zinc fingers;
sequence familyZinc finger, C2H2 type;
multimeric complexes5yj3_CD
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRHRRR

Estimated binding specificities ?

readout + contactlogo
# IC=6.778 IC/col=0.968 n_of_columns=7 specificity:   
A |  53   0   0   0   0  85  55
C |  10  96  96  96   0   0  10
G |  21   0   0   0   0  10  21
T |  12   0   0   0  96   1  10
scan!

home
updated Tue Dec 19 12:02:49 2023