8gme_BD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE GP32-DDA-DT17 COMPLEX
reference	White et al. 'To ? ? ?
experiment	X-ray (resolution=4.98, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8gme_B interface= ssedkgewklkldnagngqavirflpskndeqapfailvnhgfkkngkwyietcssthgdydscpvcqyiskndlyntdnkeyslvkrktsywanilvvkdpaapenegkvfkyrfgkkiwdkinamiavtpvdvtcpweganfvlkvkqvsgfsnydeskflnqsaipniddesfqkelfeqmvdlsemtskdkfksfeelntkfgqvmgaaataakkadkvaddldafnvddf > 8gme_D interface=88,90,91,115,117,119,122,207,243,363,382,383,384,387, tegqknafnivmkaikekkhhvtingpagtgattltkfiiealistgetgiilaapthaakkilsklsgkeasticrvlicdevsmyDrKLfkillstippwctiigigdnkqiRpVdPgeNtayispffthkdfyqceltevkrsnapiidvatdvrngkwiydkvvdghgvrgftgdtalrdfmvnyfsivkslddlfenrvmaFtnksvdklnsiirkkifetdkdfivgeiivmqeplFktykidgkpvseiifnngqlvriieaeytstfvkargvpgeylirhwdltvetygddeyyrekikiissdeelykfnlflgktaetyknwnkggkapwsdfwdaksqfskvkalpastfHkaqgmsvdrafiytpcihYADveLaqqllyvgvtrgrydvfyv
interface signature	/DKLRVPNFFHYADL

Estimated binding specificities ?

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# IC=5.440 IC/col=0.604 n_of_columns=9

specificity:

A |  14  24   0   7   7   0   0  19  24
C |  14  24   0   7   8   0   0  19  24
G |  14  24   0   8   7   0   0  19  24
T |  54  24  96  74  74  96  96  39  24

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updated Mon Dec 18 00:02:53 2023