8dlf_ABCD : 3D-footprint complex

Interface of input file ?

structure name	EBNA1 DNA BINDING DOMAIN (DBD) (458-617)+2 REPEATS OF FAMILY REPEAT (FR) REGION
experiment	NMR
structural superfamily	Viral DNA-binding domain;
reference complex	7u1t_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8dlf_A interface=2,3,4,7,8,12,20,58,61,62, rRKKggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggskTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmvega > 8dlf_B interface=6,7,11,19,20,57,60,61,64, rkkggWFgkhRgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggskTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmve > 8dlf_C interface=3,7,8,12,20,21,57,58,61,62,65, rrKkggWFgkhRgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmv > 8dlf_D interface=1,4,9,17,54,55,58,59, KggWfgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmvega
interface signature	RKKWFRKTYN/WFRKFTYNR/KWFRKFKTYNR/KWRKKTYN

Estimated binding specificities ?

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# IC=31.205 IC/col=0.678 n_of_columns=46

specificity:

A |   0   0   0  92   3  90  96   1  24  24  15   0   0  96   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0   1   0  96   1   1  24  24  24   0   0   0   0  96   0   1
C |   1   0   0   3   5   1   0   1  24  24  17  96   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24   1   0   0   0   0   1  76  24  24  24   0   0  96   1   0  72  90
G |  94  96   0   1  88   4   0   0  24  24  55   0   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  17  96  82   0   0  90   2  24  24  24  96  96   0   1   0   1   4
T |   1   0  96   0   0   1   0  94  24  24   9   0  96   0  96  24  24  24  24  24  24  24  24  24  24  24  24  24  24  78   0  13  96   0   4  17  24  24  24   0   0   0  94   0  23   1

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updated Sun Dec 17 20:44:11 2023